The detailed information of tRNA gene sequence


Sequence ID>W1610020583
Genome IDASPF01000013
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 42266
End posion on genome 42193
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaataattga
tRNA gene sequence 
GCCCTGGTAGTATAGTCCGGTTAGTATGGCGGCCTGTCGAGCCGCAGACCCGGGTTCAAA
TCCCGGCCAGGGCGttt
Downstream region at tRNA end position 
aagacttact
Secondary structure (Cloverleaf model)
>W1610020583	Asp	GTC
                   a      Gttt aagacttact
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T T A          G     AGAC
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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