The detailed information of tRNA gene sequence


Sequence ID>W1610020584
Genome IDASPF01000015
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 13280
End posion on genome 13204
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
caacggggtT
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGACAGAGCATCGGCCTTCTAAGCCGGGGGTCGGGGGTTCGA
GTCCCCCCGGGCCCGTtc
Downstream region at tRNA end position 
taaacgcttt
Secondary structure (Cloverleaf model)
>W1610020584	Arg	TCT
                   T      GTtc taaacgcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C C C C     A
    A C G A        A      | | | | |     G
  T         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    A C A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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