The detailed information of tRNA gene sequence


Sequence ID>W1610020586
Genome IDASPF01000017
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Geocrenenecus sp. JGI 0000106-J15 [ASPF]
Start position on genome 34513
End posion on genome 34600
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaagaccaat
tRNA gene sequence 
GCGGCGGTTCCCTAGCCCGGCAGGGGGGTGGCCTGCTAAGCCACTGGCCCATTGGGCCGC
GCGGGTTCAAATCCCGCCCGCCGCGCCT
Downstream region at tRNA end position 
ttcccatcca
Secondary structure (Cloverleaf model)
>W1610020586	Ser	GCT
                   t      GCCT ttcccatcca
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
      C G A        T      | | | | |     A
    C       T C C C       G C G G G     C
    C       + | | |                 T T
    G       G G G G
      G C A        G     TGGCCCATTGGGCCGC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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