The detailed information of tRNA gene sequence


Sequence ID>W1610024387
Genome IDATYM01000003
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHaloplanus natans DSM 17983 [ATYM]
Start position on genome 402114
End posion on genome 402198
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
ggctcagtgT
tRNA gene sequence 
GCCGTGTCTGGGGAGTGGTGACCCCACTGGCTTGCTACGCCAGCCCCGACGACGGGCTCT
CGGTTCGACTCCGGGACACGGCGTgg
Downstream region at tRNA end position 
tgagacatgc
Secondary structure (Cloverleaf model)
>W1610024387	Pseudo	GCT
                   T      GTgg tgagacatgc
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     T - A          T C
                    C     G G G C C     A
      T G A        T      | + | | |     G
    G       G G G G       C T C G G     C
    G       | | | |                 T T
    T       C C C C
      G A          A     CCCCGACGACGGGCT
                    C - G
                    T - A
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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