The detailed information of tRNA gene sequence


Sequence ID>W1610024400
Genome IDAUMX01000001
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanocorpusculum bavaricum DSM 4179 [AUMX]
Start position on genome 142598
End posion on genome 142524
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgcatattt
tRNA gene sequence 
GCTGCGGTGGCCTAGCTGGTTAGGGCGCGGGACTCATAATCCCGAGGTCGGGGGTTCGGA
TCCCTCTCGCAGCACtg
Downstream region at tRNA end position 
tttttttgat
Secondary structure (Cloverleaf model)
>W1610024400	Met	CAT
                   t      ACtg tttttttgat
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     G - C
                     G + T          T A
                    T     C T C C C     G
      C G A        G      | + | | |     G
    T       T C C G       G G G G G     C
    G       + | | |                 T T
    G       G G G C
      T T A        G     AGGTC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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