The detailed information of tRNA gene sequence


Sequence ID>W1610028307
Genome IDAWOB01000006
Search identical group
Phylum/ClassThermoproteota
Speciescrenarchaeote JGI-OTU-1 [AWOB]
Start position on genome 42431
End posion on genome 42508
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aaagaaaaaT
tRNA gene sequence 
GCCTCGGTAGTTTAGCCTGGTTAAGAATGTAGGCCTCTCAAGCCTAAGATCCCGGGTTCA
AATCCCGGCCGAGGCATaa
Downstream region at tRNA end position 
attttttata
Secondary structure (Cloverleaf model)
>W1610028307	Glu	CTC
                   T      ATaa attttttata
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  T         T T T G       C C G G G     C
  G         + | | +                 T T
  G         G A A T
    T T A A        G     AGATC
                    T - A
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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