The detailed information of tRNA gene sequence


Sequence ID>W1610028314
Genome IDAWOB01000008
Search identical group
Phylum/ClassThermoproteota
Speciescrenarchaeote JGI-OTU-1 [AWOB]
Start position on genome 37779
End posion on genome 37705
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atatctattg
tRNA gene sequence 
GGGCTGGTGGTCTAGCCTGGCAGGATGCCTGCCTCACACGCAGGAGTTCCCCGGTTCAAA
TCCGGGCCAGCCCACtg
Downstream region at tRNA end position 
acttctttcc
Secondary structure (Cloverleaf model)
>W1610028314	Val	CAC
                   g      ACtg acttctttcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     A
    C       T C T G       C C C G G     C
    T       + | | +                 T T
    G       G G A T
      G C A        G     AGTTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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