The detailed information of tRNA gene sequence


Sequence ID>W1610028324
Genome IDAWOC01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 4108
End posion on genome 4180
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gggcggctca
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGTAGAGCGCCCGGCTGTTAACCGGAAGGTCGTGGGTTCGAATC
CCACCGGGCCCGCat
Downstream region at tRNA end position 
ctcgtggagt
Secondary structure (Cloverleaf model)
>W1610028324	Asn	GTT
                   a      GCat ctcgtggagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      C     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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