The detailed information of tRNA gene sequence


Sequence ID>W1610028326
Genome IDAWOC01000002
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 12554
End posion on genome 12480
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
cggagtgatg
tRNA gene sequence 
GCCGCGGTGGTGTAGCTGGAAGCACTCCGGGCTGTGGACCCGGCGGTCGTGGGTTCGAGT
CCCACCCGCGGCCCAc
Downstream region at tRNA end position 
ctatttcata
Secondary structure (Cloverleaf model)
>W1610028326	His	GTG
                   g      CCAc ctatttcata
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C A C C C     A
      C G A        G      | | | | |     G
    T       T G T G       G T G G G     C
    G       + | | |                 T T
    G       G C A C
      A A          T     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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