The detailed information of tRNA gene sequence


Sequence ID>W1610028327
Genome IDAWOC01000005
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 13145
End posion on genome 13230
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cgtcgaaaaa
tRNA gene sequence 
GGGCCCGTAGCTCAGCATGGATAGAGCGCCGGCCTTCTAAGCTTGGAGAGAGCCGGAGGT
CCTGGGTTCAAGTCCCAGCGGGCCCGtcc
Downstream region at tRNA end position 
tattctttct
Secondary structure (Cloverleaf model)
>W1610028327	Arg	TCT
                   a      Gtcc tattctttct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G A C C C     A
    A C G A        A      | | | | |     A
  T         C T C G       C T G G G     C
  G         | | | |                 T T
  G         G A G C
    A T A          G     GAGAGAGCCGGAGGTC
                    C - G
                    C   T
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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