The detailed information of tRNA gene sequence


Sequence ID>W1610028331
Genome IDAWOC01000016
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 4337
End posion on genome 4264
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tggatccgtg
tRNA gene sequence 
GGGGCCGTGGTCTAGCGGTTATGACGCCGCCCTCACACGGCGGAGGTCGCCGGTTCGAAT
CCGGCCGGCCCCACat
Downstream region at tRNA end position 
ctattgaaag
Secondary structure (Cloverleaf model)
>W1610028331	Val	CAC
                   g      ACat ctattgaaag
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | | | | |     G
    G       T C T G       G C C G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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