The detailed information of tRNA gene sequence


Sequence ID>W1610028333
Genome IDAWOC01000025
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 4576
End posion on genome 4650
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
agaattgcgc
tRNA gene sequence 
GCCCCGGTAGCTCAGCCCGGTAGAGCGGCCGCCTTGTAAGCGGCAGGCCGCGGGTTCAAA
CCCCGCCCGGGGCTCat
Downstream region at tRNA end position 
ctaccttcaa
Secondary structure (Cloverleaf model)
>W1610028333	Thr	TGT
                   c      TCat ctaccttcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    C       C T C G       G C G G G     C
    C       | | | |                 T T
    G       G A G C
      G T A        G     AGGCC
                    G - C
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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