The detailed information of tRNA gene sequence


Sequence ID>W1610028337
Genome IDAWOC01000039
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 1747
End posion on genome 1673
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
aacgtagtac
tRNA gene sequence 
GCTCCGGTAGTATAGCCCGGACAAGTATGCCGGCCTTTCGAGCCGGAGACCCGGGTTCAA
ATCCCGGCCGGAGCAttt
Downstream region at tRNA end position 
ttgttttaga
Secondary structure (Cloverleaf model)
>W1610028337	Glu	TTC
                   c      Attt ttgttttaga
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    A C A A        G     AGAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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