The detailed information of tRNA gene sequence


Sequence ID>W1610028338
Genome IDAWOC01000046
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 4613
End posion on genome 4527
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ccatcgtatg
tRNA gene sequence 
GCCGGGGTGGCAGAGTGGTTAATGCGCAGGCCTGGAGAGCCTGTGGCCCTATACGGGCCG
CGAGGGTTCGAATCCCTCCCCCGGCGCgt
Downstream region at tRNA end position 
ttagtaatca
Secondary structure (Cloverleaf model)
>W1610028338	Ser	GGA
                   g      GCgt ttagtaatca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T A          G     TGGCCCTATACGGGCCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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