The detailed information of tRNA gene sequence


Sequence ID>W1610028339
Genome IDAWOC01000047
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 1806
End posion on genome 1731
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggccagagT
tRNA gene sequence 
GCCGGCGTAGCTCAGGCTGGCAGAGCGCGGGACTCATAATCCCGTCGCCGTGGGTTCGAG
TCCCACCGCCGGCATga
Downstream region at tRNA end position 
cttattacgg
Secondary structure (Cloverleaf model)
>W1610028339	Met	CAT
                   T      ATga cttattacgg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      G G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     TCGCC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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