The detailed information of tRNA gene sequence


Sequence ID>W1610028341
Genome IDAWOC01000049
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-3 [AWOC]
Start position on genome 237
End posion on genome 161
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gcgtaccggT
tRNA gene sequence 
GCGGCCGTGGTCTAGCCTGGACTAGGACGTGGGCTTTCCGAGCCCAATACCCGGGTTCAA
ATCCCGGCGGCCGCAAtg
Downstream region at tRNA end position 
ttagtcatga
Secondary structure (Cloverleaf model)
>W1610028341	Gly	TCC
                   T      AAtg ttagtcatga
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
    C C G A        G      | | | | |     A
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    A C T A        G     ATAC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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