The detailed information of tRNA gene sequence


Sequence ID>W1610028346
Genome IDAWOD01000014
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon JGI OTU-2 [AWOD]
Start position on genome 10575
End posion on genome 10501
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
catgcatatg
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGTCAGAGCGTCCGGCTGATAACCGGAAGGTCGTGGGTTCGA
ATCCCACCGGGCCCAttc
Downstream region at tRNA end position 
gcgctctcct
Secondary structure (Cloverleaf model)
>W1610028346	Ile	GAT
                   g      Attc gcgctctcct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    T C A          G     AGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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