The detailed information of tRNA gene sequence


Sequence ID>W1610028348
Genome IDAWOD01000017
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon JGI OTU-2 [AWOD]
Start position on genome 2958
End posion on genome 2871
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tcttctccgg
tRNA gene sequence 
GCGGGGGTAGCCAAGCCTGGTCAAAGGCGCAGGGCTCAGGACCCTGTCCCGTAGGGGTTC
GTGGGTTCGAATCCCACCCCCCGCACCT
Downstream region at tRNA end position 
ttgatgcgta
Secondary structure (Cloverleaf model)
>W1610028348	Leu	CAG
                   g      ACCT ttgatgcgta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C C G A        A      | | | | |     G
  T         A C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGTAGGGGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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