The detailed information of tRNA gene sequence


Sequence ID>W1610028351
Genome IDAWOD01000024
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon JGI OTU-2 [AWOD]
Start position on genome 8393
End posion on genome 8304
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ccttaggagG
tRNA gene sequence 
GCCCCGGTAGCTCAGCGGCAGAGCGCCGGCCTTGTACGCGTGAGGCAGGGAGAGCCGGTG
GTCGAGGGTTCGAATCCCTCCCGGGGCTGaa
Downstream region at tRNA end position 
agcgacgttc
Secondary structure (Cloverleaf model)
>W1610028351	Thr	TGT
                   G      TGaa agcgacgttc
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        A      | | | | |     G
      C     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     AGGCAGGGAGAGCCGGTGGTC
                    C - G
                    C   T
                    G   G
                    G - C
                    C - G
                  C       C
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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