The detailed information of tRNA gene sequence


Sequence ID>W1610028353
Genome IDAWOE01000007
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 26779
End posion on genome 26868
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gttgctgcgg
tRNA gene sequence 
GCCGGGGTGCCCGAGTGGACCAAGGGGCAGGCCTTGAGAGCCTGTGGCTCCTCCGGGGCC
GCGCGGGTTCGAATCCCGCCCCCGGCGCCA
Downstream region at tRNA end position 
tcaccgaacg
Secondary structure (Cloverleaf model)
>W1610028353	Ser	TGA
                   g      GCCA tcaccgaacg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C C       G C G G G     C
    G         | | |                 T T
    A       A G G G
      C C A        G     TGGCTCCTCCGGGGCCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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