The detailed information of tRNA gene sequence


Sequence ID>W1610028355
Genome IDAWOE01000008
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 3151
End posion on genome 3076
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtggttggga
tRNA gene sequence 
AGCGGGGTAGGGTAGCCAGGTCTATCCCGCCGGGCTCATAACCCGGAGATCGGTGGTTCA
AATCCACCCCCCGCTAatt
Downstream region at tRNA end position 
ttatataaca
Secondary structure (Cloverleaf model)
>W1610028355	Met	CAT
                   a      Aatt ttatataaca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C A C C     A
    C C G A        A      | | | | |     A
  A         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    T C T A        G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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