The detailed information of tRNA gene sequence


Sequence ID>W1610028358
Genome IDAWOE01000017
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 21269
End posion on genome 21176
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccattctggG
tRNA gene sequence 
GCCCCGGTAGCTCAGCGGTAGAGCGCCGGCCTCGTATGCAGGATGCGGCCGGGTCAGCCG
GTGGTCGAGGGTTCGAATCCCTCCCGGGGCTTCg
Downstream region at tRNA end position 
ggagctgcac
Secondary structure (Cloverleaf model)
>W1610028358	Thr	CGT
                   G      TTCg ggagctgcac
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
        G A        A      | | | | |     G
      C     C T C G       G A G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     ATGCGGCCGGGTCAGCCGGTGGTC
                    C - G
                    C - G
                    G   A
                    G - C
                    C - G
                  C       T
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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