The detailed information of tRNA gene sequence


Sequence ID>W1610028360
Genome IDAWOE01000019
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 9820
End posion on genome 9729
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gtgtgacgag
tRNA gene sequence 
GGGGCCGTAGTCTAGCATGGAGTGGACGCCCGGCTCGGGATCCTGAAGGAGGAGAACCCG
GGAGGTCGTGGGTTCAAATCCCACCGGCCCCAttt
Downstream region at tRNA end position 
tcgcggcctc
Secondary structure (Cloverleaf model)
>W1610028360	Pro	CGG
                   g      Attt tcgcggcctc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  T         T C T G       G T G G G     C
  G         + | | |                 T T
  G         G G A C
    A G T          G     AAGGAGGAGAACCCGGGAGGTC
                    C - G
                    C   T
                    C   C
                    G - C
                    G + T
                  C       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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