The detailed information of tRNA gene sequence


Sequence ID>W1610028361
Genome IDAWOE01000021
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 6992
End posion on genome 7064
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtagccttcg
tRNA gene sequence 
GGGCCGGTAGATCAGTGGCAGATCGCCCGGTTTGCGCCCGGGAGGTCGCGGGTTCGAATC
CCGCCCGGTCCACgg
Downstream region at tRNA end position 
tttttgcgcg
Secondary structure (Cloverleaf model)
>W1610028361	Ala	TGC
                   g      ACgg tttttgcgcg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     G
      T     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        C A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  T       C
                  T       G
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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