The detailed information of tRNA gene sequence


Sequence ID>W1610028366
Genome IDAWOE01000045
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 4701
End posion on genome 4627
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aagggtcgga
tRNA gene sequence 
GGGCCCGTAGCTCAGCCTGGCAGAGCGGCCGGCTCATAACCGGTAGGTCGTGGGTTCGAA
TCCCACCGGGCCCACat
Downstream region at tRNA end position 
cgttgcacgc
Secondary structure (Cloverleaf model)
>W1610028366	Met	CAT
                   a      ACat cgttgcacgc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G T G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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