The detailed information of tRNA gene sequence


Sequence ID>W1610028367
Genome IDAWOE01000050
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 11564
End posion on genome 11636
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ctttcggacg
tRNA gene sequence 
GGGGCCGTGGTCTAGTGGTTATGACGCCGCCCTTACACGGCGGAGGTCGTGGGTTCGATT
CCCACCGGCCCCAtcg
Downstream region at tRNA end position 
ggtcgaaacg
Secondary structure (Cloverleaf model)
>W1610028367	Val	TAC
                   g      Atcg ggtcgaaacg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       T C T G       G T G G G     C
    G         | | |                 T T
    T       T G A C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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