The detailed information of tRNA gene sequence


Sequence ID>W1610028374
Genome IDAWOE01000121
Search identical group
Phylum/ClassNitrososphaerota
SpeciesCandidatus Calditenuaceae archaeon JGI OTU-1 [AWOE]
Start position on genome 313
End posion on genome 387
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtgctcattg
tRNA gene sequence 
GGGGCCGTAGTCCAGCATGGAGTGGACGCCCGGCTTGGGCCCGGGAGGTCGTGGGTTCAA
ATCCCACCGGCCCCAttt
Downstream region at tRNA end position 
tcgcaacgga
Secondary structure (Cloverleaf model)
>W1610028374	Pro	TGG
                   g      Attt tcgcaacgga
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  T         C C T G       G T G G G     C
  G         | | | |                 T T
  G         G G A C
    A G T          G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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