The detailed information of tRNA gene sequence


Sequence ID>W1610028380
Genome IDAWOF01000027
Search identical group
Phylum/ClassNitrososphaerota
SpeciesThaumarchaeota archaeon JGI OTU-4 [AWOF]
Start position on genome 4430
End posion on genome 4353
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
gattaagcat
tRNA gene sequence 
GCCTCGGTAGCTCAGCCTGGTTAGAGCGAGTGCCTCGTAAGCACTAGGTCGCGGGTTCGA
ATCCCGCCCGAGGCTCTA
Downstream region at tRNA end position 
ttgatgctaa
Secondary structure (Cloverleaf model)
>W1610028380	Thr	CGT
                   t      TCTA ttgatgctaa
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        A      | | | | |     G
  T         C T C G       G C G G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    A - T
                    G - C
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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