The detailed information of tRNA gene sequence


Sequence ID>W1610028387
Genome IDAWOG01000041
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon JGI OTU-1 [AWOG]
Start position on genome 6859
End posion on genome 6775
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaatgtatat
tRNA gene sequence 
GCTGGAGTGGCACAATCTGGTACTGCGTCAGTCTCGAAAACTGATTTCCTTCGGGATATC
CAGGTTCAAATCCTGGCTCCAGCGCat
Downstream region at tRNA end position 
ttacaatgat
Secondary structure (Cloverleaf model)
>W1610028387	Ser	CGA
                   t      GCat ttacaatgat
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     G G T C C     A
      T A A        G      | | | | |     A
    C       C A C G       C C A G G     C
    T         | | |                 T T
    G       C T G C
      G T A        G     TTTCCTTCGGGATAT
                    T - A
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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