The detailed information of tRNA gene sequence


Sequence ID>W1610028390
Genome IDAWOG01000045
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon JGI OTU-1 [AWOG]
Start position on genome 2637
End posion on genome 2562
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aattaggtaT
tRNA gene sequence 
GCCTTAGTAGTGTAGCCCGGTCAGCACGGAGCCTTGTCACGGCTTCAACCCGCGTTCAAA
TCGCGGCTAAGGCGTaa
Downstream region at tRNA end position 
tattaccaaa
Secondary structure (Cloverleaf model)
>W1610028390	Asp	GTC
                   T      GTaa tattaccaaa
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A
                     A - T
                     G - C          T A
                    T     G G C G C     A
    C C G A        A      | | | | |     A
  C         T G T G       C C G C G     C
  G         + | | |                 T T
  G         G C A C
    T C A          G     CAAC
                    G + T
                    A - T
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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