The detailed information of tRNA gene sequence


Sequence ID>W1610028396
Genome IDAWOH01000025
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon JGI OTU-2 [AWOH]
Start position on genome 10377
End posion on genome 10448
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cctaaatgac
tRNA gene sequence 
GCCTCAGTAGCTCAGTGGTAGAGCAATTGCCTTGTAAGCAATAGGCCGGGGGTTCAAATC
CCTCCTGAGGCTttt
Downstream region at tRNA end position 
ttcttattta
Secondary structure (Cloverleaf model)
>W1610028396	Thr	TGT
                   c      Tttt ttcttattta
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
        G A        A      | + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGCC
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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