The detailed information of tRNA gene sequence


Sequence ID>W1610028397
Genome IDAWOH01000044
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeota archaeon JGI OTU-2 [AWOH]
Start position on genome 1383
End posion on genome 1307
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tatcgtattt
tRNA gene sequence 
GGGCTTATAGCTCAGTTGGCTAGAGCGTTGCATTCACATTGCAAAGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACTA
Downstream region at tRNA end position 
tgaagatttt
Secondary structure (Cloverleaf model)
>W1610028397	Val	CAC
                   t      ACTA tgaagatttt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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