The detailed information of tRNA gene sequence


Sequence ID>W1610030026
Genome IDAYGT01000019
Search identical group
Phylum/ClassEuryarchaeota
SpeciesNanohaloarchaea archaeon AB578-D14 [AYGT]
Start position on genome 3948
End posion on genome 3857
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acaatacact
tRNA gene sequence 
GTCGGGGTCGCATAGCCTGGCCCATTGCGGTGGCTTGCTAAGCCATTCGGCGTGCAACGC
GCCGACGCGGGTTCAAATCCCGCCCCTGACGCtg
Downstream region at tRNA end position 
aactctcaat
Secondary structure (Cloverleaf model)
>W1610030026	Ser	GCT
                   t      GCtg aactctcaat
                     G - C
                     T - A
                     C - G
                     G + T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     A
  T         T A C G       G C G G G     C
  G           | | |                 T T
  G         T T G C
    C C C A        G     TCGGCGTGCAACGCGCCGAC
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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