The detailed information of tRNA gene sequence


Sequence ID>W1610040540
Genome IDBAFM01000006
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus agarilyticus 197A [BAFM]
Start position on genome 49244
End posion on genome 49328
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gagcgaacgc
tRNA gene sequence 
GCGAGGGTGGCCGAGTCTGGCCAAAGGCGTCGGGCTTAAGACCCGATCTCTCAGGAGTTC
GTGCGTTCAAATCGCATCCCTCGCAttc
Downstream region at tRNA end position 
cacggccgat
Secondary structure (Cloverleaf model)
>W1610040540	Leu	TAA
                   c      Attc cacggccgat
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     T A C G C     A
    C T G A        G      + | | | |     A
  T         G C C G       G T G C G     C
  G           | | |                 T T
  G         A G G C
    C C A A        G     TCTCTCAGGAGTTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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