The detailed information of tRNA gene sequence


Sequence ID>W1610040546
Genome IDBAFM01000009
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalococcus agarilyticus 197A [BAFM]
Start position on genome 110295
End posion on genome 110367
Amino Acid Pseudo
Anticodon GGG
Upstream region at tRNA start position 
ttcgggacgc
tRNA gene sequence 
GGGACCGTGGGGTAGCTTGGTATCCTCGGCGCATGGGGTGCGTCGGACTCGAGTTCGAAT
CTCGACGGTCCCAtgg
Downstream region at tRNA end position 
accctttcac
Secondary structure (Cloverleaf model)
>W1610040546	Pseudo	GGG
                   c      Atgg accctttcac
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C          T A
                    T     A G C T C     A
      C G A        G      | | | | |     G
    T       T G G G       T C G A G     C
    T         | | +                 T T
    G       T C C T
      G T A        C     GGAC
                    G - C
                    G + T
                    C - G
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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