The detailed information of tRNA gene sequence


Sequence ID>W1610041018
Genome IDBANB01000460
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidisphaera rubrifaciens HS-AP3 [BANB]
Start position on genome 4625
End posion on genome 4700
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gcgcgggcgc
tRNA gene sequence 
GAGCCCGTAGCTCAGCCGGTAGAGCACGAGACTTTTAATCTTGGGGTCCTGGGTTCGAGT
CCCAGCGGGCTCACCA
Downstream region at tRNA end position 
gaccttcccc
Secondary structure (Cloverleaf model)
>W1610041018	Lys	TTT
                   c      ACCA gaccttcccc
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     G A C C C     A
      C G A        A      | | | | |     G
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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