The detailed information of tRNA gene sequence


Sequence ID>W1610041342
Genome IDBANO01000059
Search identical group
Phylum/ClassEuryarchaeota
SpeciesHalarchaeum acidiphilum MH1-52-1 [BANO]
Start position on genome 3929
End posion on genome 4013
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atcgaggtgc
tRNA gene sequence 
GCACGGGTAGCCAAGCTAGGCCAACGGCGCAGCGCTTAGGACGCTGTCCCGTAGGGGTCC
GCCGGTTCGAATCCGGTCCCGTGCAtcc
Downstream region at tRNA end position 
gtctccgaag
Secondary structure (Cloverleaf model)
>W1610041342	Leu	TAG
                   c      Atcc gtctccgaag
                     G - C
                     C - G
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
    T C G A        A      + | | | |     G
  A         A C C G       G C C G G     C
  G           | | |                 T T
  G         C G G C
    C C A A        G     TCCCGTAGGGGTCC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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