The detailed information of tRNA gene sequence


Sequence ID>W121030296
Genome IDAHFX01000058
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 2009V-1046 [AHFX]
Start position on genome 37690
End posion on genome 37782
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atatgaaagt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGTTTATAGCC
GTATCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tttattggcc
Secondary structure (Cloverleaf model)
>W121030296	Ser	GCT
                   t      GCCA tttattggcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTATAGCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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