The detailed information of tRNA gene sequence


Sequence ID>W1610043932
Genome IDBBAD01000144
Search identical group
Phylum/ClassBacillota
SpeciesSecundilactobacillus similis DSM 23365 = JCM 2765 [BBAD]
Start position on genome 1143
End posion on genome 1218
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgcaattaC
tRNA gene sequence 
GGTCCGTTGGTCTAGCTGGTTAGGACGCCTGCCTGTCACGCAGGAGATCACGAGTTCGAG
TCTCGTACGGACCGTtt
Downstream region at tRNA end position 
attttatggc
Secondary structure (Cloverleaf model)
>W1610043932	Asp	GTC
                   C      GTtt attttatggc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T G C T C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G A G     C
    G       + | | |                 T T
    G       G G A C
      T T A        G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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