The detailed information of tRNA gene sequence


Sequence ID>W121030603
Genome IDAHGC01000112
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 2010EL-1749 [AHGC]
Start position on genome 78477
End posion on genome 78401
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttacgcgcat
tRNA gene sequence 
CGGACTGTAGCGCAGCTTGGTAGCGCACCGTCATGGGGTGTCGGGGGTCGGAGGTTCAAA
TCCTCTCAGTCCGACCA
Downstream region at tRNA end position 
tacacctaaa
Secondary structure (Cloverleaf model)
>W121030603	Pro	GGG
                   t      ACCA tacacctaaa
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T   T
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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