The detailed information of tRNA gene sequence


Sequence ID>W1610045275
Genome IDBBBJ01000002
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa JCM 11217 [BBBJ]
Start position on genome 249510
End posion on genome 249417
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
ttaacgagcC
tRNA gene sequence 
CCCCCGGTAGTATAGCCCGGTCAAGTATGTGGGCCTTTCGAGCTTAAGCGGAGACAGCCC
GTGACCCGGGTTCAAATCCCGGCCGGGGGGGCA
Downstream region at tRNA end position 
ccaattttca
Secondary structure (Cloverleaf model)
>W1610045275	Pseudo	TTC
                   C      GGCA ccaattttca
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C A A        G     AGCGGAGACAGCCCGTGAC
                    T - A
                    G + T
                    G + T
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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