The detailed information of tRNA gene sequence


Sequence ID>W1610045297
Genome IDBBBK01000010
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta souniana JCM 11219 [BBBK]
Start position on genome 29438
End posion on genome 29512
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaataacga
tRNA gene sequence 
GCCCCGGTAGTATAGCTCGGTCCAGTATGCGGGCCTGTCGAGCCCGTGACCCGGGTTCAA
ATCCCGGCCGGGGGGgcg
Downstream region at tRNA end position 
cctgcaatcg
Secondary structure (Cloverleaf model)
>W1610045297	Asp	GTC
                   a      Ggcg cctgcaatcg
                     G   G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    T C G A        A      | | | | |     A
  C         T A T G       C C G G G     C
  G         + | | +                 T T
  G         G T A T
    T C C A        G     TGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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