The detailed information of tRNA gene sequence


Sequence ID>W1610045301
Genome IDBBBK01000025
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta souniana JCM 11219 [BBBK]
Start position on genome 394
End posion on genome 318
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
tcttttccct
tRNA gene sequence 
GGGCCGGTAGTCTAGCCTGGAAGGATGCCCGCCTCGCACGCGGGAGAACCCGGGTTCAAA
TCCCGGCCGGTCCACCA
Downstream region at tRNA end position 
cgggtcattc
Secondary structure (Cloverleaf model)
>W1610045301	Ala	CGC
                   t      ACCA cgggtcattc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
      C G A        A      | | | | |     A
    C       T C T G       C C G G G     C
    T       + | | +                 T T
    G       G G A T
      G A A        G     AGAAC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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