The detailed information of tRNA gene sequence


Sequence ID>W1610046501
Genome IDBBCL01000001
Search identical group
Phylum/ClassThermoproteota
SpeciesSulfuracidifex tepidarius JCM 16833 [BBCL]
Start position on genome 5365
End posion on genome 5450
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attatctaaC
tRNA gene sequence 
GCCGAGGTCGCCTAGCCTGGTAGGGCGTCGGCCTGCTAAGCCGATGAGGGAAACCTCGCA
CGGGTTCAAATCCCGTCCTCGGCGTac
Downstream region at tRNA end position 
ttacgttatt
Secondary structure (Cloverleaf model)
>W1610046501	Ser	GCT
                   C      GTac ttacgttatt
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    C       T C C G       A C G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGAGGGAAACCTCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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