The detailed information of tRNA gene sequence


Sequence ID>W1610046804
Genome IDBBCT01000006
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta distributa JCM 11215 [BBCT]
Start position on genome 106845
End posion on genome 106941
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaagaaaac
tRNA gene sequence 
GCCGGGGGTGGCCGAGCACGGTTAAGGCGCGGGCCTGCTAAGTCCGTCCCCCCCGCAAGG
GGGGGGCCCGGGTTCAAATCCCGGCCCCCCGGCACCA
Downstream region at tRNA end position 
cggtcattag
Secondary structure (Cloverleaf model)
>W1610046804	Ser	GCT
                   c      ACCA cggtcattag
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          C C
                    G     C C G G C     T
    C G A G        T      | |   +       A
  A         C C G G       G G G T T     A
  C           |   |                 C A
  G         A G G C
    G T T A        G     TCCCCCCCGCAAGGGGGGGGCCC
                    C - G
                    G - C
                    G - C
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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