The detailed information of tRNA gene sequence


Sequence ID>W1610046819
Genome IDBBCU01000002
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. JCM 11816 [BBCU]
Start position on genome 162550
End posion on genome 162626
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
tctctccaga
tRNA gene sequence 
GGGCCCGTAGCCTAGCAGGATAGGGCGCCGGCCTTCTAAGCCGGAGGTCGCGGGTTCGAA
TCCCGCCGGGCCCGCCA
Downstream region at tRNA end position 
ttctcgaaat
Secondary structure (Cloverleaf model)
>W1610046819	Arg	TCT
                   a      GCCA ttctcgaaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     G
    A       T C C G       G C G G G     C
    G       + | | |                 T T
    G       G G G C
      A T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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