The detailed information of tRNA gene sequence


Sequence ID>W1610046822
Genome IDBBCU01000004
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. JCM 11816 [BBCU]
Start position on genome 36039
End posion on genome 36129
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgggtgtatG
tRNA gene sequence 
CCGGGATCGCCTAGCCTGGGATGGCGCGGGCCTTGAGAGCCCGTGGCCGTATGGCCACCG
GGGGGGTTCAAATCCCCCGTCCCGGCGCC
Downstream region at tRNA end position 
Aaaatccctt
Secondary structure (Cloverleaf model)
>W1610046822	Ser	TGA
                   G      CGCC Aaaatccctt
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G          T A
                    C     C C C C C     A
      C C G        G      | | | | |     A
    T       A T C C       G G G G G     C
    G       | + |                   T T
    G       T G G C
      G A          G     TGGCCGTATGGCCACCGG
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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