The detailed information of tRNA gene sequence


Sequence ID>W1610046837
Genome IDBBCU01000020
Search identical group
Phylum/ClassEuryarchaeota
SpeciesThermococcus sp. JCM 11816 [BBCU]
Start position on genome 13998
End posion on genome 14078
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tacctcgggc
tRNA gene sequence 
GGGCCCGTGGTCTAGACTGGTTATGACGCCGCCCTCACACGGCGGAGGTCCGGGGGGGTT
CGAATCCCCGCGGGCCCACCA
Downstream region at tRNA end position 
tagaaacttg
Secondary structure (Cloverleaf model)
>W1610046837	Val	CAC
                   c      ACCA tagaaacttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C A G A        G        | | | |     G
  T         T C T G       G G G G G     C
  G           | | |                 T T
  G         T G A C
    T T A          G     AGGTCCGG
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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