The detailed information of tRNA gene sequence


Sequence ID>W1610046888
Genome IDBBCW01000017
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [BBCW]
Start position on genome 76089
End posion on genome 76177
Amino Acid Pseudo
Anticodon GAG
Upstream region at tRNA start position 
ccatcaaaaT
tRNA gene sequence 
GCGAGGGTTGCCCAGCCAGGTCAAAGGCGCCAGGTTGAGGGCCTGGTTTCGTAGGAATTC
GTGCGTTCGAATCGCACCCCTCGCATCA
Downstream region at tRNA end position 
agcttttttt
Secondary structure (Cloverleaf model)
>W1610046888	Pseudo	GAG
                   T      ATCA agcttttttt
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C G C     A
    C C G A        T      | | | | |     G
  A         C C C G       G T G C G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TTTCGTAGGAATTC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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