The detailed information of tRNA gene sequence


Sequence ID>W1610046901
Genome IDBBCW01000030
Search identical group
Phylum/ClassEuryarchaeota
SpeciesMethanosarcina horonobensis HB-1 = JCM 15518 [BBCW]
Start position on genome 52350
End posion on genome 52424
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
caaatctacc
tRNA gene sequence 
TGCCAGGTAGCTCAGTGGGAGAGCGCTGCCCTGAAGAGGCAGTTGTCCCCGGTTCGAATC
CGGGTCTGGGCACCA
Downstream region at tRNA end position 
taaataaata
Secondary structure (Cloverleaf model)
>W1610046901	Phe	GAA
                   c      ACCA taaataaata
                     T   C
                     G   G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
        G A        A      | | | | |     G
      T     C T C G       C C C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     TTGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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